I think when funcom implements the large storyline orgs(Omni-Pol, Clans, Omni-Med, etc....) that any player can join, they should also implement little political items. If you join a storyline org(not player-run) you should be forced to wear this little political item before you can join the storyline org. And the political item will make you open to attack by the opposing side anywhere on Rubi-Ka.
The storyline is basically a war between Omni-Tek and the Clans. If you participate in this storyline you should be expected to kill the enemy whereever you see him/her.